MtbRegList

Internal user

Quickfind:

Annotated Motif Search Type
Root Pattern (Consensus) ?
DNA Motif (Instance) ?

Root Patterns Search Parameters (Example 1) (Example 2)
Sequence ?

Limit search to a specific pattern box ?
Spacing ? Minimum:
Maximum:
Limit search to a specific spacing ?
Recognized by ?
Multiple selection is allowed (use ctrl key)
Category ?
Multiple selection is allowed (use ctrl key)
Reference ?
Note ?
Check box to display results from that field
DNA Pattern Instances Search Parameters (Example)
Sequence ?

Limit search to a specific pattern box ?
Limit to pattern box
Spacing between boxes? Minimum:
Maximum:
Limit search to a specific spacing ?
Associated Root ?
Multiple selection is allowed (use ctrl key)
Number of mismatch ?
Search a specific pattern box ?
Specify a specific pattern box:  
Genomic region ?
Strand ?
Distance ? 5':
3':
Distance is calculated between flanking gene and proximal pattern side on positive strand
Experimental evidence?
Multiple selection is allowed (use ctrl key)
Transcriptional impact ?
Multiple selection is allowed (use ctrl key)
Reference ?
Note ?
Check box to display results from that field