MtbRegList

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Intergenic Region information

Caracteristics
   
  • Name:
  • irP_Rv0005_Rv0006
  • From:
  • 7268
  • To:
  • 7301
  • Length:
  • 34
  • Status ?:
  • P

    Genomic region view

    Genes, motifs and intergenic regions are clickable. At high zoom, nucleotide values are shown.

    Related Annotated DNA motif ?
       No related DNA pattern

    Related Annotated TSS ?
       No related TSS

    Sequences (5'=>3')
    • Positive Sequence *
      CGCAACCCTGCGTTCGATTGCAAACGAGGAATAG
    • Negative Sequence **
      CTATTCCTCGTTTGCAATCGAACGCAGGGTTGCG
    • Positive 5' flanking 200 bp *
      ACAAGGGTCTAGGTGAAATGGACGCTAAGGAGTTGTGGGAGACCACCATGGATCCCTCGGTTCGTGTGTTGCGTC
      AAGTGACGCTGGACGACGCCGCCGCCGCCGACGAGTTGTTCTCCATCCTGATGGGCGAGGACGTCGACGCGCGGC
      GCAGCTTTATCACCCGCAACGCCAAGGATGTTCGGTTCCTGGATGTCTAA
    • Positive 3' flanking 200 bp *
      ATGACAGACACGACGTTGCCGCCTGACGACTCGCTCGACCGGATCGAACCGGTTGACATCGAGCAGGAGATGCAG
      CGCAGCTACATCGACTATGCGATGAGCGTGATCGTCGGCCGCGCGCTGCCGGAGGTGCGCGACGGGCTCAAGCCC
      GTGCATCGCCGGGTGCTCTATGCAATGTTCGATTCCGGCTTCCGCCCGGA
    • Negative 5' flanking 200 bp **
      TCCGGGCGGAAGCCGGAATCGAACATTGCATAGAGCACCCGGCGATGCACGGGCTTGAGCCCGTCGCGCACCTCC
      GGCAGCGCGCGGCCGACGATCACGCTCATCGCATAGTCGATGTAGCTGCGCTGCATCTCCTGCTCGATGTCAACC
      GGTTCGATCCGGTCGAGCGAGTCGTCAGGCGGCAACGTCGTGTCTGTCAT
    • Negative 3' flanking 200 bp **
      TTAGACATCCAGGAACCGAACATCCTTGGCGTTGCGGGTGATAAAGCTGCGCCGCGCGTCGACGTCCTCGCCCAT
      CAGGATGGAGAACAACTCGTCGGCGGCGGCGGCGTCGTCCAGCGTCACTTGACGCAACACACGAACCGAGGGATC
      CATGGTGGTCTCCCACAACTCCTTAGCGTCCATTTCACCTAGACCCTTGT
    * Positive sequence: Sequence as publish in the genome sequencing project
    ** Negative sequence: Reverse complement sequence