MtbRegList

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Intergenic Region information

Caracteristics
   
  • Name:
  • irP_Rv0001_Rv0002
  • From:
  • 1525
  • To:
  • 2051
  • Length:
  • 527
  • Status ?:
  • P

    Genomic region view

    Genes, motifs and intergenic regions are clickable. At high zoom, nucleotide values are shown.

    Related Annotated DNA motif ?
       No related DNA pattern

    Related Annotated TSS ?
       No related TSS

    Sequences (5'=>3')
    • Positive Sequence *
      CACGGCGTGTTCTTCCGACAACGTTCTTAAAAAAACTTCTCTCTCCCAGGTCACACCAGTCACAGAGATTGGCTG
      TGAGTGTCGCTGTGCACAAACCGCGCACAGACTCATACAGTCCCGGCGGTTCCGTTCACAACCCACGCCTCATCC
      CCACCGACCCAACACACACCCCACAGTCATCGCCACCGTCATCCACAACTCCGACCGACGTCGACCTGCACCAAG
      ACCAGACTGTCCCCAAACTGCACACCCTCTAATACTGTTACCGAGATTTCTTCGTCGTTTGTTCTTGGAAAGACA
      GCGCTGGGGATCGTTCGCTGGATACCACCCGCATAACTGGCTCGTCGCGGTGGGTCAGAGGTCAATGATGAACTT
      TCAAGTTGACGTGAGAAGCTCTACGGTTGTTGTTCGACTGCTGTTGCGGCCGTCGTGGCGGGTCACGCGTCATGG
      GCATTCGTCGTTGGCAGTCCCCACGCTAGCGGGGCGCTAGCCACGGGATCGAACTCATCGTGAGGTGAAAGGGCG
      CA
    • Negative Sequence **
      TGCGCCCTTTCACCTCACGATGAGTTCGATCCCGTGGCTAGCGCCCCGCTAGCGTGGGGACTGCCAACGACGAAT
      GCCCATGACGCGTGACCCGCCACGACGGCCGCAACAGCAGTCGAACAACAACCGTAGAGCTTCTCACGTCAACTT
      GAAAGTTCATCATTGACCTCTGACCCACCGCGACGAGCCAGTTATGCGGGTGGTATCCAGCGAACGATCCCCAGC
      GCTGTCTTTCCAAGAACAAACGACGAAGAAATCTCGGTAACAGTATTAGAGGGTGTGCAGTTTGGGGACAGTCTG
      GTCTTGGTGCAGGTCGACGTCGGTCGGAGTTGTGGATGACGGTGGCGATGACTGTGGGGTGTGTGTTGGGTCGGT
      GGGGATGAGGCGTGGGTTGTGAACGGAACCGCCGGGACTGTATGAGTCTGTGCGCGGTTTGTGCACAGCGACACT
      CACAGCCAATCTCTGTGACTGGTGTGACCTGGGAGAGAGAAGTTTTTTTAAGAACGTTGTCGGAAGAACACGCCG
      TG
    • Positive 5' flanking 200 bp *
      AGTCACGACAGATTGCGATGTACCTGTGTCGTGAGCTCACCGATCTTTCGTTGCCCAAAATCGGCCAAGCGTTCG
      GCCGTGATCACACAACCGTCATGTACGCCCAACGCAAGATCCTGTCCGAGATGGCCGAGCGCCGTGAGGTCTTTG
      ATCACGTCAAAGAACTCACCACTCGCATCCGTCAGCGCTCCAAGCGCTAG
    • Positive 3' flanking 200 bp *
      ATGGACGCGGCTACGACAAGAGTTGGCCTCACCGACTTGACGTTTCGTTTGCTACGAGAGTCTTTCGCCGATGCG
      GTGTCGTGGGTGGCTAAAAATCTGCCAGCCAGGCCCGCGGTGCCGGTGCTCTCCGGCGTGTTGTTGACCGGCTCG
      GACAACGGTCTGACGATTTCCGGATTCGACTACGAGGTTTCCGCCGAGGC
    • Negative 5' flanking 200 bp **
      GCCTCGGCGGAAACCTCGTAGTCGAATCCGGAAATCGTCAGACCGTTGTCCGAGCCGGTCAACAACACGCCGGAG
      AGCACCGGCACCGCGGGCCTGGCTGGCAGATTTTTAGCCACCCACGACACCGCATCGGCGAAAGACTCTCGTAGC
      AAACGAAACGTCAAGTCGGTGAGGCCAACTCTTGTCGTAGCCGCGTCCAT
    • Negative 3' flanking 200 bp **
      CTAGCGCTTGGAGCGCTGACGGATGCGAGTGGTGAGTTCTTTGACGTGATCAAAGACCTCACGGCGCTCGGCCAT
      CTCGGACAGGATCTTGCGTTGGGCGTACATGACGGTTGTGTGATCACGGCCGAACGCTTGGCCGATTTTGGGCAA
      CGAAAGATCGGTGAGCTCACGACACAGGTACATCGCAATCTGTCGTGACT
    * Positive sequence: Sequence as publish in the genome sequencing project
    ** Negative sequence: Reverse complement sequence